EnhancerDB
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  3. rs183081489[chr16:1771109]
Enhancers that have rs183081489[chr16:1771109]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 1759265 1774552 enh3842
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs183081489[chr16:1771109]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 1771105 1771110 SP1 TRANSFAC yes 9158649
chr16 1771106 1771111 SP1 TRANSFAC yes 9158650
chr16 1771109 1771122 NFKB1 JASPAR yes 9158651
Genes associated with rs183081489[chr16:1771109], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More