EnhancerDB
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  3. rs1833454[chr12:47687053]
Enhancers that have rs1833454[chr12:47687053]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 47684745 47715015 enh2317
Large Intestine Prostate (RWPE1) Esophagus Astrocyte Liver Blood (OCI-LY7) Blood (GM12878) Stomach Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Spleen Uterus Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs1833454[chr12:47687053]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 47686352 47687181 ZNF143 GTRD no Epithelial (MCF-7) 21543252
chr12 47686395 47687179 ZNF274 GTRD no Blood (GM12878) 21543253
chr12 47686395 47687238 ZNF274 GTRD no Blood (GM12878) 21543254
chr12 47686400 47687307 ZNF143 GTRD no Epithelial (MCF-7) 21543255
chr12 47686502 47687147 ZNF274 GTRD no Blood (GM12878) 21543256
chr12 47686535 47687154 ZNF143 GTRD no Epithelial (MCF-7) 21543257
chr12 47686548 47687135 ZNF143 GTRD no Epithelial (MCF-7) 21543258
chr12 47686553 47687081 ZNF274 GTRD no Blood (GM12878) 21543259
chr12 47686555 47687099 ZNF143 GTRD no Epithelial (MCF-7) 21543260
chr12 47686622 47687135 ZNF143 GTRD no Epithelial (MCF-7) 21543262
chr12 47686708 47687064 ZNF143 GTRD no Epithelial (MCF-7) 21543266
chr12 47687045 47687056 FOXC1 JASPAR yes 120692705
Genes associated with rs1833454[chr12:47687053], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More