EnhancerDB
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Enhancers that have rs183407197[chr16:28204382]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 28190945 28218035 enh3961
Skin (Keratinocyte) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Thymus Epithelial (MCF-7)
Transcript factors that have rs183407197[chr16:28204382]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 28203738 28204874 ZNF274 GTRD no Bone Marrow (K562) 108190904
chr16 28204292 28204976 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21701352
chr16 28204292 28204976 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108190905
chr16 28204336 28204855 ZNF143 GTRD no Epithelial (MCF-7) 21701353
chr16 28204336 28204855 ZNF143 GTRD no Epithelial (MCF-7) 108190906
chr16 28204362 28204860 ZNF143 GTRD no Epithelial (MCF-7) 21701354
chr16 28204362 28204860 ZNF143 GTRD no Epithelial (MCF-7) 108190907
chr16 28204374 28204385 NFIL3 JASPAR yes 10221345
chr16 28204375 28204387 DBP JASPAR yes 10221346
chr16 28204375 28204387 HLF JASPAR yes 10221347
chr16 28204377 28204385 GMEB2 JASPAR yes 10221348
Genes associated with rs183407197[chr16:28204382], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More