EnhancerDB
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  3. rs183417401[chr5:171530761]
Enhancers that have rs183417401[chr5:171530761]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171526400 171541439 enh8877
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Breast Muscle (Myoblast) Prostate (RWPE1) Lung Heart
Transcript factors that have rs183417401[chr5:171530761]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171530744 171530762 IRF2 JASPAR yes 67762851
chr5 171530747 171530762 PRDM1 JASPAR yes 67762852
chr5 171530749 171530761 IRF1 JASPAR yes 67762853
chr5 171530760 171530766 TBP TRANSFAC yes 67762855
chr5 171530760 171530771 FOXC1 JASPAR yes 67762856
chr5 171530760 171530772 FOXC2 JASPAR yes 67762857
Genes associated with rs183417401[chr5:171530761], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More