EnhancerDB
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  3. rs183500704[chr17:53525720]
Enhancers that have rs183500704[chr17:53525720]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 53505736 53535115 enh4475
Brain (SK-N-MC) Liver Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs183500704[chr17:53525720]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 53525470 53525988 ZNF274 GTRD no Liver (HepG2) 21772671
chr17 53525472 53526030 ZNF274 GTRD no Liver (HepG2) 21772672
chr17 53525473 53526071 ZNF274 GTRD no Liver (HepG2) 21772673
chr17 53525714 53525723 SP1 TRANSFAC yes 54852296
chr17 53525715 53525723 SP1 TRANSFAC yes 54852297
chr17 53525715 53525725 SP1 JASPAR yes 54852298
Genes associated with rs183500704[chr17:53525720], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More