EnhancerDB
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  3. rs183642421[chr12:53355920]
Enhancers that have rs183642421[chr12:53355920]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 53348905 53377069 enh14737
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs183642421[chr12:53355920]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 53354677 53356506 TCF7L2 GTRD no Colon (HCT116) 21548269
chr12 53354777 53355998 ZNF274 GTRD no Bone Marrow (K562) 21548270
chr12 53354913 53356108 ZNF274 GTRD no Bone Marrow (K562) 21548272
chr12 53354917 53356295 ZNF274 GTRD no Bone Marrow (K562) 21548273
chr12 53354941 53356307 ZNF274 GTRD no Bone Marrow (K562) 21548276
chr12 53355042 53356222 ZNF274 GTRD no Bone Marrow (K562) 21548282
chr12 53355056 53356209 ZNF274 GTRD no Bone Marrow (K562) 21548284
chr12 53355101 53356040 ZNF274 GTRD no Bone Marrow (K562) 21548291
chr12 53355401 53356078 TCF7L2 GTRD no Colon (HCT116) 21548300
chr12 53355908 53355922 PLAG1 JASPAR yes 120966794
chr12 53355913 53355920 E2F1 TRANSFAC yes 120966795
Genes associated with rs183642421[chr12:53355920], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More