EnhancerDB
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  3. rs183912292[chr16:28103730]
Enhancers that have rs183912292[chr16:28103730]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 28098765 28106942 enh16617
Skin (Keratinocyte) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Placenta Colon (HCT116) Thyroid Lung (PC-9) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs183912292[chr16:28103730]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 28102930 28103830 P63 GTRD no Skin (Keratinocyte) 21701333
chr16 28102930 28103830 P63 GTRD no Skin (Keratinocyte) 108190859
chr16 28102931 28103830 P63 GTRD no Skin (Keratinocyte) 21701334
chr16 28102931 28103830 P63 GTRD no Skin (Keratinocyte) 108190860
chr16 28102938 28103757 P63 GTRD no Skin (Keratinocyte) 21701335
chr16 28103020 28103862 P63 GTRD no Skin (Keratinocyte) 21701336
chr16 28103020 28103862 P63 GTRD no Skin (Keratinocyte) 108190861
chr16 28103457 28103954 TCF7L2 GTRD no Colon (HCT116) 21701337
chr16 28103457 28103954 TCF7L2 GTRD no Colon (HCT116) 108190862
chr16 28103547 28104276 ZNF274 GTRD no Blood (GM12878) 108190863
chr16 28103552 28104309 ZNF143 GTRD no Epithelial (MCF-7) 21701338
chr16 28103552 28104309 ZNF143 GTRD no Epithelial (MCF-7) 108190864
chr16 28103594 28104260 TCF7L2 GTRD no Colon (HCT116) 21701339
chr16 28103594 28104260 TCF7L2 GTRD no Colon (HCT116) 108190865
chr16 28103676 28103901 TCF7L2 GTRD no Colon (HCT116) 21701340
chr16 28103676 28103901 TCF7L2 GTRD no Colon (HCT116) 108190866
chr16 28103712 28103731 CTCF JASPAR yes 10217168
chr16 28103725 28103742 ESR1 JASPAR yes 10217169
chr16 28103725 28103743 ESR2 JASPAR yes 10217170
Genes associated with rs183912292[chr16:28103730], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More