EnhancerDB
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  3. rs183968210[chr1:205638781]
Enhancers that have rs183968210[chr1:205638781]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205631965 205647955 enh50152
Large Intestine Prostate (RWPE1) Liver Blood (OCI-LY7) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
chr1 205638734 205639222 vista4758
VISTA
Transcript factors that have rs183968210[chr1:205638781]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205638532 205639053 ZNF274 GTRD no Bone Marrow (K562) 107862433
chr1 205638649 205638833 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21372161
chr1 205638649 205638833 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107862434
chr1 205638759 205639089 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21372162
chr1 205638759 205639089 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107862435
chr1 205638766 205638783 RXRA JASPAR yes 34777868
chr1 205638766 205638783 RXRA JASPAR yes 118441840
chr1 205638770 205638785 NR2C2 JASPAR yes 34777869
chr1 205638770 205638785 NR2C2 JASPAR yes 118441841
chr1 205638779 205638791 TFAP2A JASPAR yes 34777870
chr1 205638779 205638791 TFAP2A JASPAR yes 118441842
chr1 205638780 205638791 TFAP2A JASPAR yes 34777871
chr1 205638780 205638791 TFAP2B JASPAR yes 34777872
chr1 205638780 205638791 TFAP2A JASPAR yes 118441843
chr1 205638780 205638791 TFAP2B JASPAR yes 118441844
Genes associated with rs183968210[chr1:205638781], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More