EnhancerDB
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  3. rs185089798[chr17:55690631]
Enhancers that have rs185089798[chr17:55690631]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55673238 55692440 enh4492
Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs185089798[chr17:55690631]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55689750 55690927 TEF1 GTRD no Bone (Osteoblast) 108274213
chr17 55689812 55690687 ZBTB33 GTRD no Brain (SK-N-SH) 108274215
chr17 55689842 55690833 ZBTB33 GTRD no Brain (SK-N-SH) 108274217
chr17 55689857 55690649 ZBTB33 GTRD no Brain (SK-N-SH) 108274218
chr17 55689958 55690687 ZBTB33 GTRD no Brain (SK-N-SH) 108274222
chr17 55690132 55690988 ZNF274 GTRD no Blood (GM12878) 21773661
chr17 55690132 55690988 ZNF274 GTRD no Blood (GM12878) 108274233
chr17 55690618 55690634 POU4F3 JASPAR yes 54975512
chr17 55690620 55690634 POU4F1 JASPAR yes 54975513
chr17 55690628 55690643 SCRT1 JASPAR yes 54975514
chr17 55690631 55690646 FOXA1 JASPAR yes 54975515
Genes associated with rs185089798[chr17:55690631], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More