EnhancerDB
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  3. rs185717852[chr12:96623270]
Enhancers that have rs185717852[chr12:96623270]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 96582645 96638775 enh14921
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs185717852[chr12:96623270]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 96623259 96623270 USF1 JASPAR yes 123050398
chr12 96623259 96623270 USF2 JASPAR yes 123050399
chr12 96623260 96623270 SREBF2 JASPAR yes 123050400
chr12 96623260 96623270 TFE3 JASPAR yes 123050401
chr12 96623260 96623270 TFEB JASPAR yes 123050402
chr12 96623260 96623270 TFEC JASPAR yes 123050403
chr12 96623266 96623271 ATF1 TRANSFAC yes 123050404
Genes associated with rs185717852[chr12:96623270], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More