EnhancerDB
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  3. rs186230227[chr1:115707279]
Enhancers that have rs186230227[chr1:115707279]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 115706465 115714135 enh12174
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Uterus Epithelial (MCF-7)
Transcript factors that have rs186230227[chr1:115707279]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 115704818 115708163 ZNF143 GTRD no Epithelial (MCF-7) 21330687
chr1 115706215 115707926 ZNF274 GTRD no Cervix (HeLa-S3) 21330690
chr1 115706312 115707575 ZNF143 GTRD no Epithelial (MCF-7) 21330691
chr1 115706481 115707698 ZNF143 GTRD no Epithelial (MCF-7) 21330692
chr1 115706531 115707564 ZNF143 GTRD no Epithelial (MCF-7) 21330693
chr1 115706535 115708049 ZNF143 GTRD no Epithelial (MCF-7) 21330694
chr1 115706569 115707512 ZNF143 GTRD no Epithelial (MCF-7) 21330695
chr1 115706574 115707446 ZNF274 GTRD no Cervix (HeLa-S3) 21330696
chr1 115706632 115707459 ZNF274 GTRD no Cervix (HeLa-S3) 21330698
chr1 115706632 115707466 ZNF274 GTRD no Cervix (HeLa-S3) 21330699
chr1 115706690 115707416 ZNF143 GTRD no Epithelial (MCF-7) 21330700
chr1 115706722 115707719 ZNF143 GTRD no Epithelial (MCF-7) 21330701
chr1 115706741 115707800 ZNF143 GTRD no Epithelial (MCF-7) 21330703
chr1 115706841 115707709 ZNF143 GTRD no Epithelial (MCF-7) 21330704
chr1 115707274 115707284 RORA JASPAR yes 31712971
chr1 115707275 115707286 ESRRA JASPAR yes 31712972
chr1 115707275 115707286 ESRRB JASPAR yes 31712973
chr1 115707277 115707285 NR4A2 JASPAR yes 31712974
chr1 115707279 115707283 ESR1 TRANSFAC yes 31712975
Genes associated with rs186230227[chr1:115707279], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More