EnhancerDB
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  3. rs186499080[chr17:46562836]
Enhancers that have rs186499080[chr17:46562836]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 46553725 46585590 enh4456
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs186499080[chr17:46562836]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 46562831 46562852 IRF1 JASPAR yes 54588630
chr17 46562833 46562848 PRDM1 JASPAR yes 54588631
chr17 46562833 46562848 STAT2 JASPAR yes 54588632
Genes associated with rs186499080[chr17:46562836], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More