EnhancerDB
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  3. rs186508177[chr17:53519569]
Enhancers that have rs186508177[chr17:53519569]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 53505736 53535115 enh4475
Brain (SK-N-MC) Liver Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs186508177[chr17:53519569]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 53519551 53519572 IRF1 JASPAR yes 54851252
chr17 53519560 53519571 DUX4 JASPAR yes 54851255
chr17 53519560 53519571 PHOX2A JASPAR yes 54851256
chr17 53519560 53519571 PROP1 JASPAR yes 54851257
Genes associated with rs186508177[chr17:53519569], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More