EnhancerDB
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  3. rs186734286[chr1:172886798]
Enhancers that have rs186734286[chr1:172886798]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172860479 172890491 enh12377
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung (A549) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs186734286[chr1:172886798]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172886788 172886799 HOXA10 JASPAR yes 33166095
chr1 172886789 172886799 EN2 JASPAR yes 33166096
chr1 172886789 172886799 ESX1 JASPAR yes 33166097
chr1 172886789 172886799 GBX1 JASPAR yes 33166098
chr1 172886789 172886799 GBX2 JASPAR yes 33166099
chr1 172886789 172886799 GSX2 JASPAR yes 33166100
chr1 172886789 172886799 HESX1 JASPAR yes 33166101
chr1 172886789 172886799 HOXB2 JASPAR yes 33166102
chr1 172886789 172886799 HOXB3 JASPAR yes 33166103
chr1 172886789 172886799 MEOX2 JASPAR yes 33166104
chr1 172886789 172886799 MNX1 JASPAR yes 33166105
chr1 172886789 172886799 RAX JASPAR yes 33166106
chr1 172886790 172886798 BARX1 JASPAR yes 33166107
chr1 172886790 172886798 BSX JASPAR yes 33166108
chr1 172886790 172886798 ISL2 JASPAR yes 33166109
chr1 172886790 172886798 LMX1B JASPAR yes 33166110
chr1 172886790 172886798 MSX1 JASPAR yes 33166111
chr1 172886790 172886798 MSX2 JASPAR yes 33166112
chr1 172886790 172886799 VENTX JASPAR yes 33166113
chr1 172886792 172886813 IRF1 JASPAR yes 33166114
chr1 172886794 172886809 PRDM1 JASPAR yes 33166115
chr1 172886794 172886809 STAT2 JASPAR yes 33166116
chr1 172886796 172886808 IRF1 JASPAR yes 33166117
chr1 172886798 172886813 FOXP1 JASPAR yes 33166118
chr1 172886798 172886819 IRF1 JASPAR yes 33166119
Genes associated with rs186734286[chr1:172886798], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More