EnhancerDB
  1. Home
  2. SNP
  3. rs186827686[chr6:41694412]
Enhancers that have rs186827686[chr6:41694412]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 41672005 41699742 enh9103
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs186827686[chr6:41694412]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 41694398 41694412 RXRG JASPAR yes 101669705
chr6 41694398 41694413 NR2C2 JASPAR yes 101669706
chr6 41694401 41694414 NR2F1 JASPAR yes 101669707
Genes associated with rs186827686[chr6:41694412], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More