EnhancerDB
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  3. rs186945640[chr17:53528869]
Enhancers that have rs186945640[chr17:53528869]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 53505736 53535115 enh4475
Brain (SK-N-MC) Liver Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs186945640[chr17:53528869]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 53528594 53529098 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21772690
chr17 53528650 53529094 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21772691
chr17 53528699 53528955 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21772692
chr17 53528700 53529036 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21772693
chr17 53528719 53529015 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21772694
chr17 53528727 53529007 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772695
chr17 53528867 53528879 TAL1 JASPAR yes 54852756
chr17 53528868 53528880 BHLHE23 JASPAR yes 54852757
chr17 53528869 53528879 BHLHE22 JASPAR yes 54852758
chr17 53528869 53528879 NEUROD2 JASPAR yes 54852759
chr17 53528869 53528879 OLIG1 JASPAR yes 54852760
chr17 53528869 53528879 OLIG2 JASPAR yes 54852761
chr17 53528869 53528879 OLIG3 JASPAR yes 54852762
chr17 53528869 53528881 TAL1 JASPAR yes 54852763
Genes associated with rs186945640[chr17:53528869], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More