EnhancerDB
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  3. rs187079281[chr1:220908902]
Enhancers that have rs187079281[chr1:220908902]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 220903525 220910295 enh941
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Ovary Lung (PC-9) Astrocyte Bone (Osteoblast) Lung Stomach Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs187079281[chr1:220908902]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 220908339 220909227 ZNF143 GTRD no Epithelial (MCF-7) 21381827
chr1 220908442 220909295 ZNF143 GTRD no Epithelial (MCF-7) 21381828
chr1 220908446 220909407 ZNF143 GTRD no Epithelial (MCF-7) 21381829
chr1 220908530 220909322 ZNF274 GTRD no Cervix (HeLa-S3) 21381830
chr1 220908586 220909212 ZNF143 GTRD no Epithelial (MCF-7) 21381831
chr1 220908631 220909155 ZNF143 GTRD no Epithelial (MCF-7) 21381832
chr1 220908674 220909273 ZNF143 GTRD no Epithelial (MCF-7) 21381833
chr1 220908684 220908990 ZNF274 GTRD no Cervix (HeLa-S3) 21381834
chr1 220908691 220909015 ZNF274 GTRD no Cervix (HeLa-S3) 21381835
chr1 220908694 220909197 ZNF143 GTRD no Epithelial (MCF-7) 21381836
chr1 220908756 220909046 ZNF274 GTRD no Cervix (HeLa-S3) 21381837
chr1 220908817 220909003 ZNF143 GTRD no Epithelial (MCF-7) 21381838
chr1 220908889 220908903 ONECUT1 JASPAR yes 35506798
chr1 220908889 220908903 ONECUT2 JASPAR yes 35506799
chr1 220908889 220908903 ONECUT3 JASPAR yes 35506800
chr1 220908898 220908913 HNF1A JASPAR yes 35506801
chr1 220908899 220908912 HNF1B JASPAR yes 35506802
chr1 220908900 220908912 HNF1B JASPAR yes 35506803
chr1 220908902 220908918 SOX8 JASPAR yes 35506804
Genes associated with rs187079281[chr1:220908902], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More