EnhancerDB
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  3. rs1871233[chr17:79398289]
Enhancers that have rs1871233[chr17:79398289]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 79375645 79405275 enh17444
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs1871233[chr17:79398289]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 79398279 79398293 GLIS3 JASPAR yes 56326815
chr17 79398282 79398302 RREB1 JASPAR yes 56326817
chr17 79398283 79398295 GLI2 JASPAR yes 56326818
chr17 79398285 79398299 PLAG1 JASPAR yes 56326819
Genes associated with rs1871233[chr17:79398289], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More