EnhancerDB
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  3. rs187152717[chr5:171569116]
Enhancers that have rs187152717[chr5:171569116]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171565199 171613524 enh8878
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs187152717[chr5:171569116]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171569112 171569117 SP1 TRANSFAC yes 67767086
chr5 171569113 171569118 SP1 TRANSFAC yes 67767087
chr5 171569113 171569119 SP1 TRANSFAC yes 67767088
Genes associated with rs187152717[chr5:171569116], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More