EnhancerDB
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  3. rs187268489[chr1:23917398]
Enhancers that have rs187268489[chr1:23917398]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23909968 23931495 enh127
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs187268489[chr1:23917398]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23914288 23917633 ZNF274 GTRD no Blood (GM12878) 107802429
chr1 23914288 23917633 ZNF274 GTRD no Blood (GM12878) 107802430
chr1 23917380 23917400 RREB1 JASPAR yes 27444476
chr1 23917381 23917402 IRF1 JASPAR yes 27444478
chr1 23917384 23917404 RREB1 JASPAR yes 27444480
chr1 23917385 23917405 RREB1 JASPAR yes 27444482
chr1 23917387 23917402 FOXP1 JASPAR yes 27444484
chr1 23917392 23917398 TCF4 TRANSFAC yes 27444485
chr1 23917392 23917404 FOXI1 JASPAR yes 27444486
chr1 23917392 23917407 FOXP1 JASPAR yes 27444487
chr1 23917393 23917405 FOXC2 JASPAR yes 27444488
chr1 23917395 23917406 FOXA1 JASPAR yes 27444489
Genes associated with rs187268489[chr1:23917398], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More