EnhancerDB
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  3. rs187393795[chr1:172874761]
Enhancers that have rs187393795[chr1:172874761]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172860479 172890491 enh12377
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung (A549) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus Epithelial (MCF-7)
chr1 172874674 172874828 vista3923
VISTA
Transcript factors that have rs187393795[chr1:172874761]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172874533 172875537 ZBTB33 GTRD no Brain (SK-N-SH) 107846240
chr1 172874699 172875463 ZBTB33 GTRD no Brain (SK-N-SH) 107846241
chr1 172874719 172875598 ZNF274 GTRD no Blood (GM12878) 107846242
chr1 172874730 172875552 ZNF274 GTRD no Blood (GM12878) 107846243
chr1 172874730 172875564 ZNF274 GTRD no Blood (GM12878) 107846244
chr1 172874754 172875561 ZNF274 GTRD no Blood (GM12878) 107846245
chr1 172874755 172874775 RREB1 JASPAR yes 33164036
chr1 172874755 172874775 RREB1 JASPAR yes 118400487
chr1 172874760 172874766 ZNF354C JASPAR yes 33164037
chr1 172874760 172874766 ZNF354C JASPAR yes 118400488
Genes associated with rs187393795[chr1:172874761], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More