EnhancerDB
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  3. rs187479545[chr1:36631572]
Enhancers that have rs187479545[chr1:36631572]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 36623405 36636370 enh239
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Heart
Transcript factors that have rs187479545[chr1:36631572]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 36631561 36631572 USF1 JASPAR yes 28122442
chr1 36631561 36631572 USF2 JASPAR yes 28122443
chr1 36631564 36631577 NFKB1 JASPAR yes 28122444
chr1 36631569 36631575 ZNF354C JASPAR yes 28122445
chr1 36631570 36631580 ID4 JASPAR yes 28122446
chr1 36631571 36631580 SNAI2 JASPAR yes 28122447
chr1 36631572 36631577 USF2 TRANSFAC yes 28122448
Genes associated with rs187479545[chr1:36631572], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More