EnhancerDB
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  3. rs187562408[chr16:11198000]
Enhancers that have rs187562408[chr16:11198000]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 11167765 11210995 enh3882
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs187562408[chr16:11198000]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 11197809 11199445 ZNF143 GTRD no Epithelial (MCF-7) 108180194
chr16 11197873 11199658 ZNF274 GTRD no Cervix (HeLa-S3) 21689563
chr16 11197873 11199658 ZNF274 GTRD no Cervix (HeLa-S3) 108180195
chr16 11197991 11198010 PAX5 JASPAR yes 9487322
chr16 11197999 11198003 NFE TRANSFAC yes 9487323
Genes associated with rs187562408[chr16:11198000], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More