EnhancerDB
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  3. rs187643923[chr17:39821715]
Enhancers that have rs187643923[chr17:39821715]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39816776 39838995 enh4409
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Lung (PC-9) Blood (GM12878) Placenta Colon (HCT116) Uterus Thyroid Blood (Karpas-422) Peripheral Blood (MM.1S) Pancreas Neural Stem Cells (H9) Thymus
Transcript factors that have rs187643923[chr17:39821715]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39817613 39822691 ZNF274 GTRD no Blood (GM12878) 21758082
chr17 39817613 39822691 ZNF274 GTRD no Blood (GM12878) 108259243
chr17 39817750 39822683 ZNF274 GTRD no Blood (GM12878) 21758083
chr17 39817750 39822683 ZNF274 GTRD no Blood (GM12878) 108259244
chr17 39820264 39822656 ZNF274 GTRD no Blood (GM12878) 21758084
chr17 39820264 39822656 ZNF274 GTRD no Blood (GM12878) 108259245
chr17 39820496 39822665 ZNF274 GTRD no Blood (GM12878) 21758085
chr17 39820496 39822665 ZNF274 GTRD no Blood (GM12878) 108259246
chr17 39821527 39822490 ZNF274 GTRD no Blood (GM12878) 21758086
chr17 39821527 39822490 ZNF274 GTRD no Blood (GM12878) 108259247
chr17 39821703 39821716 SMAD2 JASPAR yes 54270345
chr17 39821705 39821716 E2F6 JASPAR yes 54270346
chr17 39821706 39821727 ZNF263 JASPAR yes 54270347
chr17 39821708 39821723 ZIC3 JASPAR yes 54270348
chr17 39821712 39821726 PLAG1 JASPAR yes 54270349
chr17 39821712 39821732 RREB1 JASPAR yes 54270350
chr17 39821713 39822358 ZNF143 GTRD no Epithelial (MCF-7) 108259248
Genes associated with rs187643923[chr17:39821715], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More