EnhancerDB
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  3. rs187715630[chr1:178121108]
Enhancers that have rs187715630[chr1:178121108]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178110905 178126935 enh12409
Skin (Keratinocyte) Prostate (PC-3) Large Intestine Esophagus Astrocyte Placenta Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs187715630[chr1:178121108]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178120573 178121185 MYOD GTRD no Muscle (Myoblast) 107847283
chr1 178120776 178121309 TCF7L2 GTRD no Colon (HCT116) 107847284
chr1 178120950 178121466 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107847285
chr1 178121101 178121112 STAT1 JASPAR yes 33398087
chr1 178121104 178121122 RARA JASPAR yes 33398089
Genes associated with rs187715630[chr1:178121108], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More