EnhancerDB
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Enhancers that have rs187820452[chr1:212659952]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212648565 212664795 enh12641
Astrocyte Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs187820452[chr1:212659952]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212659413 212660063 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21378879
chr1 212659413 212660063 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107868508
chr1 212659544 212659980 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107868516
chr1 212659807 212660097 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21378885
chr1 212659855 212660055 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21378886
chr1 212659904 212660584 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21378887
chr1 212659912 212660422 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21378888
chr1 212659945 212659955 MAX JASPAR yes 35129106
chr1 212659946 212659956 CLOCK JASPAR yes 35129107
chr1 212659946 212659956 MAX JASPAR yes 35129108
chr1 212659946 212659956 MLXIPL JASPAR yes 35129109
chr1 212659946 212659956 MLX JASPAR yes 35129110
chr1 212659946 212659956 MNT JASPAR yes 35129111
chr1 212659946 212659956 TFE3 JASPAR yes 35129112
chr1 212659946 212659956 TFEB JASPAR yes 35129113
chr1 212659946 212659956 TFEC JASPAR yes 35129114
chr1 212659947 212659957 MAX JASPAR yes 35129115
chr1 212659948 212659953 MYC TRANSFAC yes 35129116
chr1 212659948 212659953 USF1 TRANSFAC yes 35129117
chr1 212659948 212659953 USF2 TRANSFAC yes 35129118
chr1 212659948 212659955 USF1 JASPAR yes 35129119
Genes associated with rs187820452[chr1:212659952], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More