EnhancerDB
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  3. rs187843896[chr17:80247523]
Enhancers that have rs187843896[chr17:80247523]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80234785 80270055 enh4646
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs187843896[chr17:80247523]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80247341 80249571 TCF7L2 GTRD no Colon (HCT116) 21798690
chr17 80247367 80249648 TCF7L2 GTRD no Colon (HCT116) 21798691
chr17 80247512 80247527 MEF2C JASPAR yes 56358364
chr17 80247512 80249378 TCF7L2 GTRD no Colon (HCT116) 21798692
chr17 80247513 80247528 MEF2A JASPAR yes 56358365
chr17 80247514 80247526 MEF2A JASPAR yes 56358366
chr17 80247514 80247526 MEF2B JASPAR yes 56358367
chr17 80247514 80247526 MEF2D JASPAR yes 56358368
chr17 80247516 80249647 ZNF143 GTRD no Epithelial (MCF-7) 21798693
Genes associated with rs187843896[chr17:80247523], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More