EnhancerDB
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  3. rs187878250[chr12:52222513]
Enhancers that have rs187878250[chr12:52222513]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52218612 52224015 enh29576
Brain (SK-N-SH) Epithelial (MCF-7) Astrocyte Breast Neural Stem Cells (H9) Stomach
Transcript factors that have rs187878250[chr12:52222513]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52220702 52222527 ZNF143 GTRD no Epithelial (MCF-7) 21545756
chr12 52220786 52222717 ZNF143 GTRD no Epithelial (MCF-7) 21545757
chr12 52221676 52222515 ZBTB33 GTRD no Brain (SK-N-SH) 21545765
chr12 52221712 52222629 ZNF143 GTRD no Epithelial (MCF-7) 21545767
chr12 52221717 52222577 ZNF143 GTRD no Epithelial (MCF-7) 21545768
chr12 52221751 52222841 ZNF143 GTRD no Epithelial (MCF-7) 21545770
chr12 52221765 52222666 ZNF143 GTRD no Epithelial (MCF-7) 21545771
chr12 52221769 52222587 ZNF143 GTRD no Epithelial (MCF-7) 21545772
chr12 52221770 52222644 ZNF143 GTRD no Epithelial (MCF-7) 21545773
chr12 52221815 52222513 ZNF143 GTRD no Epithelial (MCF-7) 21545775
chr12 52221861 52222631 ZNF143 GTRD no Epithelial (MCF-7) 21545776
chr12 52221882 52222551 ZNF143 GTRD no Epithelial (MCF-7) 21545777
chr12 52221890 52222526 ZNF143 GTRD no Epithelial (MCF-7) 21545778
chr12 52221896 52222519 ZNF143 GTRD no Epithelial (MCF-7) 21545779
chr12 52221916 52222533 ZNF143 GTRD no Epithelial (MCF-7) 21545783
chr12 52222499 52222514 TFAP2A JASPAR yes 120902482
chr12 52222500 52222514 PLAG1 JASPAR yes 120902487
chr12 52222501 52222521 ESR1 JASPAR yes 120902489
chr12 52222506 52222521 ESR2 JASPAR yes 120902490
Genes associated with rs187878250[chr12:52222513], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More