EnhancerDB
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  3. rs187880662[chr17:38478654]
Enhancers that have rs187880662[chr17:38478654]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38463228 38485935 enh4408
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Lung (PC-9) Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Pancreas (Panc1) Uterus Blood (T-cell) Heart
chr17 38477236 38480096 vista24701
VISTA
Transcript factors that have rs187880662[chr17:38478654]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38478362 38479018 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108254484
chr17 38478438 38478754 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108254485
chr17 38478442 38479783 POLR2A UCSC Txn Factor no Conserved 108254486
chr17 38478451 38478851 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21753648
chr17 38478451 38478851 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108254487
chr17 38478451 38478921 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108254488
chr17 38478491 38479061 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108254489
chr17 38478507 38479007 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21753649
chr17 38478507 38479007 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108254490
chr17 38478513 38478986 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21753650
chr17 38478513 38478986 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108254491
chr17 38478515 38478887 ESR1 UCSC Txn Factor no Conserved 108254492
chr17 38478565 38478945 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21753651
chr17 38478565 38478945 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108254493
chr17 38478573 38478883 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108254494
chr17 38478635 38478999 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21753652
chr17 38478635 38478999 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108254495
chr17 38478642 38479232 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21753653
chr17 38478642 38479232 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108254496
chr17 38478645 38479081 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21753654
chr17 38478645 38479081 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108254497
Genes associated with rs187880662[chr17:38478654], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More