EnhancerDB
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  3. rs187916290[chr17:80451815]
Enhancers that have rs187916290[chr17:80451815]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80448407 80467804 enh4648
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs187916290[chr17:80451815]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80448905 80452854 TCF7L2 GTRD no Colon (HCT116) 21800299
chr17 80450211 80451828 TCF7L2 GTRD no Colon (HCT116) 21800308
chr17 80450557 80452924 TCF7L2 GTRD no Colon (HCT116) 21800311
chr17 80451038 80453650 TCF7L2 GTRD no Colon (HCT116) 21800320
chr17 80451802 80451815 NFKB1 JASPAR yes 56367247
chr17 80451802 80451815 NFKB2 JASPAR yes 56367248
chr17 80451805 80451816 CEBPB JASPAR yes 56367249
chr17 80451808 80451820 YY1 JASPAR yes 56367250
Genes associated with rs187916290[chr17:80451815], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More