EnhancerDB
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  3. rs188001730[chr1:167241939]
Enhancers that have rs188001730[chr1:167241939]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 167228665 167248455 enh705
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Blood (T-cell) Lung (A549) Blood (GM12878) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Pancreas (Panc1) Blood (Karpas-422) Lung (PC-9) Spleen Neural Stem Cells (H9) Thymus Stomach
Transcript factors that have rs188001730[chr1:167241939]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 167241930 167241941 GCM1 JASPAR yes 32856654
chr1 167241931 167241941 GCM2 JASPAR yes 32856655
Genes associated with rs188001730[chr1:167241939], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More