EnhancerDB
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  3. rs188027289[chr1:9605541]
Enhancers that have rs188027289[chr1:9605541]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 9595905 9627275 enh49
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Thymus Cervix (HeLa-S3) Esophagus Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs188027289[chr1:9605541]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 9605533 9605548 NR2C2 JASPAR yes 26659954
chr1 9605539 9605544 SP1 TRANSFAC yes 26659955
Genes associated with rs188027289[chr1:9605541], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More