EnhancerDB
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  3. rs188040007[chr1:230211542]
Enhancers that have rs188040007[chr1:230211542]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 230203175 230225395 enh12769
Astrocyte Colon (HCT116) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs188040007[chr1:230211542]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 230211239 230213783 ZNF274 GTRD no Blood (GM12878) 107878312
chr1 230211518 230213864 ZNF274 GTRD no Blood (GM12878) 107878313
chr1 230211532 230211553 ZNF263 JASPAR yes 36018562
chr1 230211536 230211554 RARA JASPAR yes 36018563
chr1 230211537 230211543 SP1 TRANSFAC yes 36018564
chr1 230211538 230211543 SP1 TRANSFAC yes 36018565
chr1 230211541 230211547 ETS1 JASPAR yes 36018566
chr1 230211541 230211547 SPI1 JASPAR yes 36018567
Genes associated with rs188040007[chr1:230211542], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More