EnhancerDB
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  3. rs188045486[chr1:52002561]
Enhancers that have rs188045486[chr1:52002561]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 51998705 52011795 enh359
Prostate (PC-3) Cervix (HeLa-S3) Stomach Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Uterus Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs188045486[chr1:52002561]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52002554 52002565 NRL JASPAR yes 28847099
chr1 52002558 52002568 GSC2 JASPAR yes 28847100
chr1 52002558 52002568 GSC JASPAR yes 28847101
chr1 52002559 52002567 OTX1 JASPAR yes 28847102
chr1 52002559 52002567 OTX2 JASPAR yes 28847103
chr1 52002559 52002568 PITX3 JASPAR yes 28847104
Genes associated with rs188045486[chr1:52002561], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More