EnhancerDB
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  3. rs188068386[chr16:4989524]
Enhancers that have rs188068386[chr16:4989524]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 4988771 5002255 enh16521
Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Heart
Transcript factors that have rs188068386[chr16:4989524]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 4989521 4989534 DUXA JASPAR yes 9292402
chr16 4989522 4989533 DUX4 JASPAR yes 9292403
chr16 4989522 4989533 PHOX2A JASPAR yes 9292404
chr16 4989522 4989533 PROP1 JASPAR yes 9292405
chr16 4989522 4989538 POU4F2 JASPAR yes 9292406
chr16 4989522 4989538 POU4F3 JASPAR yes 9292407
chr16 4989523 4989533 PAX3 JASPAR yes 9292408
chr16 4989523 4989533 PAX7 JASPAR yes 9292409
chr16 4989524 4989538 POU4F1 JASPAR yes 9292410
chr16 4989524 4989539 HNF1A JASPAR yes 9292411
Genes associated with rs188068386[chr16:4989524], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More