EnhancerDB
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  3. rs188134508[chr6:110856720]
Enhancers that have rs188134508[chr6:110856720]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 110836885 110871534 enh23506
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs188134508[chr6:110856720]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 110856709 110856730 IRF1 JASPAR yes 104295173
chr6 110856710 110856724 GATA2 JASPAR yes 104295174
chr6 110856715 110856736 IRF1 JASPAR yes 104295176
Genes associated with rs188134508[chr6:110856720], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More