EnhancerDB
  1. Home
  2. SNP
  3. rs188149180[chr2:223690728]
Enhancers that have rs188149180[chr2:223690728]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 223687885 223715130 enh34305
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Stomach Colon (HCT116) Lung (PC-9) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs188149180[chr2:223690728]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 223690720 223690728 ISX JASPAR yes 81216042
chr2 223690720 223690728 LHX9 JASPAR yes 81216043
chr2 223690720 223690728 LMX1B JASPAR yes 81216044
chr2 223690720 223690728 PRRX1 JASPAR yes 81216045
chr2 223690720 223690728 RAX2 JASPAR yes 81216046
chr2 223690720 223690728 SHOX JASPAR yes 81216047
chr2 223690720 223690728 UNCX JASPAR yes 81216048
chr2 223690721 223690731 PAX3 JASPAR yes 81216049
Genes associated with rs188149180[chr2:223690728], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More