EnhancerDB
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  3. rs188220988[chr3:122693620]
Enhancers that have rs188220988[chr3:122693620]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 122686605 122709095 enh20858
Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Esophagus Astrocyte Bone (Osteoblast) Lung Blood (OCI-LY7) Placenta Thyroid Uterus Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Breast Muscle (Myotube) Neural Stem Cells (H9) Heart
chr3 122690302 122695291 vista1157
VISTA
Transcript factors that have rs188220988[chr3:122693620]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 122693609 122693625 SOX4 JASPAR yes 5292252
chr3 122693609 122693625 SOX4 JASPAR yes 20999122
chr3 122693610 122693625 SOX21 JASPAR yes 5292253
chr3 122693610 122693625 SOX21 JASPAR yes 20999123
chr3 122693620 122693634 POU4F1 JASPAR yes 5292254
chr3 122693620 122693634 POU4F1 JASPAR yes 20999124
chr3 122693620 122693636 POU4F3 JASPAR yes 5292255
chr3 122693620 122693636 POU4F3 JASPAR yes 20999125
Genes associated with rs188220988[chr3:122693620], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More