EnhancerDB
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  3. rs188342581[chr1:108475907]
Enhancers that have rs188342581[chr1:108475907]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 108474065 108488635 enh548
Prostate (PC-3) Epithelial (MCF-7) Blood (T-cell) Lung (PC-9) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Blood (Karpas-422) Muscle (Myoblast) Breast Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs188342581[chr1:108475907]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 108475887 108475907 RREB1 JASPAR yes 31369954
chr1 108475889 108475909 RREB1 JASPAR yes 31369955
chr1 108475892 108475912 RREB1 JASPAR yes 31369956
chr1 108475894 108475914 RREB1 JASPAR yes 31369957
chr1 108475901 108475916 FOXP1 JASPAR yes 31369958
chr1 108475902 108475913 FOXP2 JASPAR yes 31369959
chr1 108475902 108475917 STAT2 JASPAR yes 31369960
Genes associated with rs188342581[chr1:108475907], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More