EnhancerDB
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  3. rs188373860[chr3:185449028]
Enhancers that have rs188373860[chr3:185449028]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 185440105 185457635 enh36218
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9)
Transcript factors that have rs188373860[chr3:185449028]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 185449024 185449045 IRF1 JASPAR yes 8281451
chr3 185449026 185449041 PRDM1 JASPAR yes 8281452
chr3 185449026 185449041 STAT2 JASPAR yes 8281453
chr3 185449027 185449041 SPIC JASPAR yes 8281454
chr3 185449027 185449041 STAT1 JASPAR yes 8281455
chr3 185449028 185449043 IRF9 JASPAR yes 8281456
chr3 185449028 185449049 IRF1 JASPAR yes 8281457
Genes associated with rs188373860[chr3:185449028], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More