EnhancerDB
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  3. rs188472088[chr16:27380735]
Enhancers that have rs188472088[chr16:27380735]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 27372645 27392475 enh16615
Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs188472088[chr16:27380735]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 27380353 27380926 ZNF143 GTRD no Epithelial (MCF-7) 21700968
chr16 27380370 27381080 ZNF143 GTRD no Epithelial (MCF-7) 21700969
chr16 27380693 27381010 ZNF143 GTRD no Epithelial (MCF-7) 21700970
chr16 27380734 27380738 LFA1 TRANSFAC yes 10189191
Genes associated with rs188472088[chr16:27380735], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More