EnhancerDB
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  3. rs188526687[chr12:117355818]
Enhancers that have rs188526687[chr12:117355818]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 117350745 117365303 enh2616
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs188526687[chr12:117355818]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 117355799 117355820 IRF1 JASPAR yes 124032204
chr12 117355800 117355821 IRF1 JASPAR yes 124032205
chr12 117355801 117355821 RREB1 JASPAR yes 124032207
chr12 117355804 117355819 FOXP1 JASPAR yes 124032209
chr12 117355805 117355826 IRF1 JASPAR yes 124032210
chr12 117355806 117355826 RREB1 JASPAR yes 124032211
chr12 117355808 117355823 FOXP1 JASPAR yes 124032212
chr12 117355810 117355825 FOXP1 JASPAR yes 124032213
Genes associated with rs188526687[chr12:117355818], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More