EnhancerDB
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  3. rs188560465[chr17:80452420]
Enhancers that have rs188560465[chr17:80452420]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80448407 80467804 enh4648
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs188560465[chr17:80452420]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80448905 80452854 TCF7L2 GTRD no Colon (HCT116) 21800299
chr17 80450557 80452924 TCF7L2 GTRD no Colon (HCT116) 21800311
chr17 80451038 80453650 TCF7L2 GTRD no Colon (HCT116) 21800320
chr17 80451876 80452837 ZNF143 GTRD no Epithelial (MCF-7) 21800325
chr17 80452132 80452656 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21800331
chr17 80452146 80452616 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21800332
chr17 80452150 80452767 ZNF274 GTRD no Bone Marrow (K562) 21800333
chr17 80452159 80452882 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21800334
chr17 80452166 80452982 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21800335
chr17 80452168 80452867 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21800336
chr17 80452209 80452759 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21800337
chr17 80452214 80452444 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21800338
chr17 80452216 80452620 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21800339
chr17 80452218 80453102 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21800340
chr17 80452253 80452649 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21800341
chr17 80452280 80452850 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21800342
chr17 80452290 80452520 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21800343
chr17 80452292 80452568 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21800344
chr17 80452310 80452634 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21800345
chr17 80452316 80452780 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21800346
chr17 80452318 80452674 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21800347
chr17 80452319 80452703 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21800348
chr17 80452326 80456410 ZBTB33 GTRD no Lung (A549) 108312160
chr17 80452326 80456410 ZBTB33 GTRD no Lung (A549) 108312161
chr17 80452327 80452703 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21800349
chr17 80452355 80452931 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21800350
chr17 80452356 80452792 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21800351
chr17 80452369 80452725 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21800352
chr17 80452373 80452629 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21800353
chr17 80452385 80452533 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21800354
chr17 80452391 80452751 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21800355
chr17 80452393 80452723 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21800356
chr17 80452413 80452723 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21800357
chr17 80452413 80452733 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21800358
chr17 80452413 80452877 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21800359
chr17 80452417 80452531 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21800360
Genes associated with rs188560465[chr17:80452420], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More