EnhancerDB
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  3. rs188568517[chr6:45573715]
Enhancers that have rs188568517[chr6:45573715]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 45568305 45585004 enh39021
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Stomach Muscle (A673) Lung (PC-9) Muscle (Myoblast) Epithelial (MCF-7)
Transcript factors that have rs188568517[chr6:45573715]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 45573707 45573717 NFATC3 JASPAR yes 101908505
chr6 45573708 45573715 NFATC2 JASPAR yes 101908506
chr6 45573711 45573721 ALX3 JASPAR yes 101908507
chr6 45573711 45573721 GBX1 JASPAR yes 101908508
chr6 45573711 45573721 HESX1 JASPAR yes 101908509
chr6 45573711 45573721 LBX2 JASPAR yes 101908510
chr6 45573712 45573716 H1TF2 TRANSFAC yes 101908511
chr6 45573712 45573716 NFE TRANSFAC yes 101908512
chr6 45573712 45573716 SRF TRANSFAC yes 101908513
chr6 45573712 45573720 BARX1 JASPAR yes 101908514
chr6 45573712 45573720 BSX JASPAR yes 101908515
chr6 45573712 45573720 EN1 JASPAR yes 101908516
chr6 45573712 45573720 ISX JASPAR yes 101908517
chr6 45573712 45573720 LHX9 JASPAR yes 101908518
chr6 45573712 45573720 MSX1 JASPAR yes 101908519
chr6 45573712 45573720 MSX2 JASPAR yes 101908520
chr6 45573712 45573720 PRRX1 JASPAR yes 101908521
chr6 45573712 45573720 RAX2 JASPAR yes 101908522
chr6 45573712 45573720 SHOX JASPAR yes 101908523
Genes associated with rs188568517[chr6:45573715], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More