EnhancerDB
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  3. rs188600421[chr1:2220307]
Enhancers that have rs188600421[chr1:2220307]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 2213745 2234616 enh11425
Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Lung Stomach Muscle (A673) Placenta Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs188600421[chr1:2220307]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 2220290 2220310 RREB1 JASPAR yes 26232177
chr1 2220298 2220308 MZF1 JASPAR yes 26232178
chr1 2220298 2220313 NR2C2 JASPAR yes 26232179
chr1 2220300 2220310 SP1 JASPAR yes 26232180
chr1 2220301 2220307 SP1 TRANSFAC yes 26232181
chr1 2220301 2220311 SP1 JASPAR yes 26232182
chr1 2220302 2220312 SP1 JASPAR yes 26232183
Genes associated with rs188600421[chr1:2220307], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More