EnhancerDB
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  3. rs188628542[chr1:31977946]
Enhancers that have rs188628542[chr1:31977946]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 31947645 31983179 enh198
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Liver Blood (T-cell) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Spleen Thymus Epithelial (MCF-7)
Transcript factors that have rs188628542[chr1:31977946]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 31977939 31977957 RARA JASPAR yes 27935751
chr1 31977940 31977956 RFX5 JASPAR yes 27935752
chr1 31977941 31977950 NFIX JASPAR yes 27935753
chr1 31977942 31977948 NFIC JASPAR yes 27935754
chr1 31977943 31977963 ESR1 JASPAR yes 27935755
chr1 31977945 31977956 ESRRA JASPAR yes 27935756
chr1 31977945 31977956 ESRRB JASPAR yes 27935757
chr1 31977946 31977964 ESR2 JASPAR yes 27935758
chr1 31977946 31977966 PPARG JASPAR yes 27935759
Genes associated with rs188628542[chr1:31977946], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More