EnhancerDB
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  3. rs1886396[chr1:52004485]
Enhancers that have rs1886396[chr1:52004485]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 51998705 52011795 enh359
Prostate (PC-3) Cervix (HeLa-S3) Stomach Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Uterus Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs1886396[chr1:52004485]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52004485 52004489 H1TF2 TRANSFAC yes 28847458
chr1 52004485 52004489 NFE TRANSFAC yes 28847459
chr1 52004485 52004489 SRF TRANSFAC yes 28847460
Genes associated with rs1886396[chr1:52004485], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More