EnhancerDB
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  3. rs188653069[chr17:78835586]
Enhancers that have rs188653069[chr17:78835586]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78831119 78853255 enh4640
Skin (Keratinocyte) Brain (SK-N-SH) Blood (T-cell) Bone (Osteoblast) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs188653069[chr17:78835586]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78835228 78835795 TCF7L2 GTRD no Colon (HCT116) 21797439
chr17 78835228 78835795 TCF7L2 GTRD no Colon (HCT116) 108307922
chr17 78835579 78835593 SPI1 JASPAR yes 56286634
chr17 78835579 78835593 SPIC JASPAR yes 56286635
Genes associated with rs188653069[chr17:78835586], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More