EnhancerDB
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  3. rs188674953[chr1:153569262]
Enhancers that have rs188674953[chr1:153569262]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 153567604 153573987 enh628
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Neural Stem Cells (H9) Thymus Stomach
Transcript factors that have rs188674953[chr1:153569262]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 153564894 153570045 AR GTRD no Prostate (PC-3) 21339756
chr1 153565230 153570252 ZNF274 GTRD no Cervix (HeLa-S3) 21339758
chr1 153565323 153569412 TCF7L2 GTRD no Colon (HCT116) 21339759
chr1 153566370 153569277 ZNF274 GTRD no Cervix (HeLa-S3) 21339760
chr1 153567482 153569339 TCF7L2 GTRD no Colon (HCT116) 21339763
chr1 153567486 153569333 ZNF274 GTRD no Cervix (HeLa-S3) 21339764
chr1 153567501 153569445 TCF7L2 GTRD no Colon (HCT116) 21339766
chr1 153567567 153569269 ZNF274 GTRD no Cervix (HeLa-S3) 21339774
chr1 153567577 153569263 ZNF274 GTRD no Cervix (HeLa-S3) 21339775
chr1 153568078 153569702 TCF7L2 GTRD no Colon (HCT116) 21339786
chr1 153568315 153569328 CTCF GTRD no Spleen 21339791
chr1 153569245 153569266 IRF1 JASPAR yes 32261617
chr1 153569249 153569264 IRF9 JASPAR yes 32261618
chr1 153569251 153569272 IRF1 JASPAR yes 32261619
chr1 153569253 153569268 STAT2 JASPAR yes 32261621
chr1 153569254 153569268 STAT1 JASPAR yes 32261622
chr1 153569255 153569267 IRF1 JASPAR yes 32261623
chr1 153569255 153569269 IRF7 JASPAR yes 32261624
chr1 153569255 153569269 IRF8 JASPAR yes 32261625
chr1 153569255 153569270 IRF9 JASPAR yes 32261626
Genes associated with rs188674953[chr1:153569262], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More