EnhancerDB
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  3. rs188736178[chr17:27465943]
Enhancers that have rs188736178[chr17:27465943]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 27463605 27492255 enh4319
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs188736178[chr17:27465943]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 27465891 27466421 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21748759
chr17 27465891 27466421 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108246436
chr17 27465938 27465955 RXRA JASPAR yes 53716224
chr17 27465939 27465948 SP1 TRANSFAC yes 53716225
chr17 27465940 27465960 RREB1 JASPAR yes 53716226
chr17 27465941 27465948 SP1 TRANSFAC yes 53716227
chr17 27465942 27465947 SP1 TRANSFAC yes 53716228
chr17 27465942 27465948 SP1 TRANSFAC yes 53716229
chr17 27465943 27465963 RREB1 JASPAR yes 53716230
Genes associated with rs188736178[chr17:27465943], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More